使用NGS进行快速微生物鉴定（RMID）

种属特异性鉴定的靶标​

革兰氏阴性菌

Desulfovibrio alaskensis​

Prevotella histicola​

Enterococcus faecium​

Ruminococcus gnavus​

Acinetobacter baumannii​

Enterobacter cloacae​

Proteus mirabilis​

Enterococcus gallinarum​

Slackia exigua​

Bacteroides fragilis​

Escherichia coli​

Pseudomonas aeruginosa​

Enterococcus hirae​

Staphylococcus aureus​

Bacteroides nordii​

Fusobacterium nucleatum​

Serratia marcescens​

Eubacterium limosum​

Staphylococcus epidermidis​

Bacteroides thetaiotaomicron​

Gardnerella vaginalis​

Veillonella parvula​

Eubacterium rectale​

Staphylococcus haemolyticus​

Bacteroides vulgatus​

Gemmiger formicilis​

革兰氏阳性菌

Faecalibacterium prausnitzii​

Streptococcus gallolyticus​

Barnesiella intestinihominis​

Haemophilus influenzae​

Anaerococcus vaginalis​

Holdemania filiformis​

Streptococcus infantarius​

Borrelia burgdorferi​

Helicobacter bilis​

Atopobium parvulum​

Lactobacillus acidophilus​

Streptococcus pneumoniae​

Campylobacter concisus​

Helicobacter bizzozeronii​

Bifidobacterium adolescentis​

Lactobacillus delbrueckii​

Streptococcus pyogenes​

Campylobacter curvus​

Helicobacter hepaticus​

Bifidobacterium animalis​

Lactobacillus johnsonii​

Streptococcus salivarius​

Campylobacter gracilis​

Helicobacter pylori​

Bifidobacterium bifidum​

Lactobacillus murinus​

Streptococcus sanguinis​

Campylobacter hominis​

Klebsiella oxytoca​

Bifidobacterium longum​

Lactobacillus reuteri​

Mycoplasma

Campylobacter jejuni​

Klebsiella pneumoniae​

Blautia obeum​

Lactobacillus rhamnosus​

Mycoplasma fermentans ​

Campylobacter rectus​

Neisseria meningitidis​

Clostridium difficile​

Lactococcus lactis​

Mycoplasma penetrans ​

Chlamydia pneumoniae​

Parabacteroides distasonis​

Collinsella aerofaciens​

Parvimonas micra​

真菌​

Chlamydia trachomatis​

Parabacteroides merdae​

Collinsella stercoris​

Peptostreptococcus anaerobius​

Candida albicans​

Citrobacter freundii​

Phascolarctobacterium faecium​

Cutibacterium acnes​

Peptostreptococcus stomatis​

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Citrobacter rodentium​

Porphyromonas gingivalis​

Dorea formicigenerans​

Roseburia intestinalis​

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Cloacibacillus porcorum​

Prevotella copri​

Enterococcus faecalis​

Ruminococcus bromii​