Fluorophores and Their Amine-Reactive Derivatives—Chapter 1

Long-Wavelength Rhodamines, Texas Red Dyes and QSY Quenchers—Section 1.6

• Tetramethylrhodamine
• Lissamine Rhodamine B and Rhodamine Red-X Dyes
• X-Rhodamine
• Texas Red and Texas Red-X Dyes
• Naphthofluorescein
• Carboxyrhodamine 6G
• QSY Dyes: Fluorescence Quenchers
• Nonfluorescent Malachite Green

Coumarins, Pyrenes and Other Ultraviolet Light-Excitable Fluorophores—Section 1.7

• Alexa Fluor 350 and Other Coumarin Derivatives
• Pacific Orange Dye
• Cascade Blue and Other Pyrene Derivatives
• Cascade Yellow and Other Pyridyloxazole Derivatives
• Naphthalenes, Including Dansyl Chloride
• Dapoxyl Dye
• Bimane

Reagents for Analysis of Low Molecular Weight Amines—Section 1.8

• Fluorescamine
• Dialdehydes: OPA and NDA
• ATTO-TAG Reagents
• 7-Nitrobenz-2-Oxa-1,3-Diazole (NBD) Derivatives
• Dansyl Chloride and Other Sulfonyl Chlorides
• FITC and Other Isothiocyanates
• Succinimidyl Esters and Carboxylic Acids

Related Tables

• Molecular Probes amine-reactive dyes—Table 1.1
• Active esters and kits for labeling proteins and nucleic acids—Table 1.2
• Molecular Probes kits for protein and nucleic acid labeling—Table 1.3
• Alexa Fluor active esters and kits for labeling proteins and nucleic acids—Table 1.4
• Fluorescence quantum yields (QY) and lifetimes (τ) for Alexa Fluor dyes—Table 1.5
• R<0> values for some Alexa Fluor dyes—Table 1.6
• Amine-reactive BODIPY dyes—Table 1.7
• Amine-reactive xanthene derivatives—Table 1.8
• Amine-reactive, orange- and red-fluorescent fluorophores—Table 1.9
• Molecular Probes nonfluorescent quenchers and photosensitizers—Table 1.10
• R<0> values for QSY and dabcyl quenchers—Table 1.11
• Amine-reactive, ultraviolet light-excitable fluorophores for labeling proteins and nucleic acids—Table 1.12
• Amine-reactive, environment-sensitive fluorophores—Table 1.13

Technical Notes

• The Alexa Fluor Dye Series—Note 1.1
• Fluorescence Resonance Energy Transfer (FRET)—Note 1.2
• Fluorescence Correlation Spectroscopy (FCS)—Note 1.3
• Fluorescence Polarization (FP)—Note 1.4
• Fluorescent Probes for Two-Photon Microscopy—Note 1.5