CytoScan™ 750K Training Kit (Available Outside US/Canada Only)

The CytoScan™ 750K Customer Training Kit is a training kit for the CytoScan™ 750K SuiteThe complete CytoScan 750K Suite includesRead more

Catalog Number	Quantity
901860	1 kit

Catalog number 901860

Price (CNY)

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1 kit

The CytoScan™ 750K Customer Training Kit is a training kit for the CytoScan™ 750K Suite

The complete CytoScan 750K Suite includes CytoScan 750K Arrays, CytoScan Reagent Kit, easy-to-use Chromosome Analysis Suite (ChAS) Software, and the proven GeneChip™ Instrument System.

Whole-genome coverage: best value
CytoScan 750K Suite enables cytogenetic researchers to detect and analyze relevant chromosomal aberrations with confidence. CytoScan 750K Suite provides high-resolution coverage of cancer and constitutional genes of interest, along with high-density SNP coverage for loss of heterozygosity (LOH) detection.

The CytoScan 750K Array provides a cost-effective solution that delivers industry-leading performance. CytoScan 750K Array, reagents, and software were developed with input from the international cytogenetics community to deliver an intuitive platform for fast and reliable detection of chromosomal aberrations.

Optimized reagent kit: streamlined workflow
CytoScan 750K Suite is designed to save time and money and reduce operator error. The simplified and streamlined assay protocol is aligned with laboratory workflow requirements, making it easier to obtain consistent and high-quality results. Each component passes strict quality control inspection to ensure the highest reproducibility and performance with CytoScan 750K Arrays. The CytoScan protocol can be accomplished in 2.5 days with just seven hours of hands-on time.

High density SNPs for heterozygocity determination
CytoScan 750K Array includes 200,000 gene-centric SNPs to enable confident breakpoint estimation, 5 Mb loss of heterozygosity (LOH) determination and detection of uniparental iso-disomy (UPD) and regions identical-by-descent.

Chromosome Analysis Suite (ChAS) Software: designed by cytogeneticists for cytogeneticists
The popular ChAS Software is tailored to cytogenetic research analysis and reporting. The software is available free of charge as part of the complete CytoScan 750K Suite.

• To install ChAS onto one or more analysis workstations, download the ChAS Software zip file, extract the zip archive, and install by following the instructions in the Installation Instructions file.
• GeneChip array-specific GeneChip Command Console™ Software plug-in package is required for each array. Please download these and other array-specific files.

Download the latest Chromosome Analysis Suite (ChAS) 3.1 Software (zip, 266 MB)

Hardware and Software Requirements, ChAS 3.1 (pdf, 121 KB)

ChAS Analysis Files for the CytoScan 750K Array version NA33.1 (zip, 345 MB)

Download the most recent Fluidics Scripts

Download the AGCC™ CytoScan 750K Array Software plug-in (zip, 91.7 MB)

CytoScan 750K Customer Training: get ready for success
Customer training is required for CytoScan 750K assay for both new and existing customers. Different products are available based upon your experience level; please contact your regional sales distributor for more information. Also, see our CytoScan 750K Training Kit (outside US and Canada only).

Related Links
CytoScan™ 750K Array Kit and Reagent Kit Bundle (Available Outside US/Canada Only)

For Research Use Only. Not for use in diagnostic procedures.

Specifications

Number of Markers750,000 markers

Quantity1 kit

Type750K Training Kit

ArrayCytogenetics, Copy Number

FormatGenechip Probe Array

Number of Arrays24 arrays

Unit SizeEach

Frequently asked questions (FAQs)

Why does the CytoScan Assay User Guide state on page 35 to always prepare Fragmentation Master Mix according to Table 9 even when processing less than 24 samples?

It is critical to have correct size of the fragments for an optimal hybridization. The fragmentation reagent is very viscous, and it is easier to get a correct proportion of enzyme when a larger volume is used. Therefore, our recommendation is to always prepare a master mix for 24 samples, even if a smaller number of samples are processed.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

What are the fill volumes of the reagents in the CytoScan Reagent Kit?

We can only guarantee the volume that is indicated on the label. Since our assurance guarantee is only provided for the label volume we advise not planning experiments or standard operating procedures based on potential overage volumes.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

What are the stopping points in the CytoScan Reagent Kit assay?

After any stage in the assay (except digestion), samples can be stored at -20 degrees C if one is not proceeding directly to the next step. However, once a stage has been initiated, it must be completed before storage of the samples.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

How many freeze/thaw cycles are validated for CytoScan Reagent Kit (24 samples)?

CytoScan Reagent Kit (Cat. No. 901808) is validated for for 4 in-use freeze/thaw events but have to use the kit within a month (30 days) once opened even if they have not gone through 4 freeze-thaws.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

What is the recommended genomic DNA extraction methods used for the CytoScan assay?

Both blood and cell line sample sources have been tested with the CytoScan assay.
Methods that include boiling or strong denaturants are not acceptable because the DNA would be rendered single-stranded. Genomic DNA extracted using the following methods have been tested at ThermoFisher Scientific:

QIAGEN - Gentra Puregene Kit
5 PRIME - PerfectPure DNA Blood Kit
The CytoScan assay requires genomic DNA concentration >50 ng/µL. Therefore, the elution volumes for each of the kits will need to be adjusted accordingly to achieve the desired concentration.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

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