How to Compare Slices Side by Side
Demo
10 Feb 2021 - This tutorial explains how to perform a side-by-side comparison of two slices that display different information; for example, of raw data and its corresponding labeled image. Learn more
Non-Standard Python Package Installation Tutorial
Demo, Misc
13 Jan 2021 - This Xtra provides a brief video that explains how to install a Python package in a newly created Python environment using pip or edm. Learn more
FIBSEM Mitochondria Segmentation
Deep learning model
12 Jan 2021 - Pre-trained model for the Deep Learning Prediction module detecting mitochondria in a Focused Ion Beam Scanning Electron Microscope (FIBSEM) data set. Learn more
Python (pyscro), Data
4 Jan 2021 - This module performs an adaptive global thresholding of the input image by computing a deviation from the mean of its grayscale values. Learn more
How to Create and Animate a Camera Path
Demo
3 Jan 2021 - This tutorial explains how to create a camera path, and then animate the camera along this path with the Animation Director. Learn more
How to Animate the Appearance of Objects with the Animation Director
Demo
3 Jan 2021 - This tutorial explains how to animate the appearance and disappearance of objects with the Animation Director. Learn more
How to Get Started with the Animation Director
Demo
3 Jan 2021 - This tutorial demonstrates the basic techniques of animation creation with the Animation Director. Learn more
Automatic Extraction of Transparent Surface Cross Section
Python (pyscro), Project (hx, pgo)
20 Oct 2020 - A module for creating partially transparent capping surfaces. Learn more
Demo
5 Oct 2020 - This Xtra provides a brief video that explains how to set up an AMIRA_LOCAL path on Windows 10. Learn more
Multi-Scale Cylinder Correlation
Python (pyscro), Project (hx, pgo)
30 Jul 2020 - This module gives better results for fiber-tracing in the case of multiple fibers with differing or varying diameters in the same dataset. Learn more
Create a Porosity Analysis Recipe
Recipe (hxrecipe), Demo
15 Jul 2020 - This tutorial explains how to create a simple porosity analysis and turn it into a push-button recipe. Learn more
Interactive Top-Hat by Reconstruction
XPand module
3 Jul 2020 - This module provides an interactive Top-Hat segmentation that prevents the segmentation of "false positive" porosity on the edges. Learn more
Molar Segmentation Using Watershed, Top-Hat, and Surface Generation
Project (hx, pgo), Demo, Data
11 May 2020 - Data, tutorial, and complete project for segmenting a CT-scanned human molar artifact. The tutorial and project cover advanced image segmentation and surface generation. Learn more
Amira User's Guide translated to Japanese
Demo, Misc
29 Jan 2020 - You will find here a large selection of Amira tutorials translated to Japanese. Learn more
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
21 Oct 2019 - This tutorial demonstrated how to quantify thickness distribution along the length Learn more
Porosity Clustering Analysis and Distance to Surface
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
21 Oct 2019 - This tutorial demonstrates the steps necessary to quantify porosity distribution and perform a pore distance to surface analysis. Learn more
Export Spatial Graph to MS Excel CSV Document
Recipe (hxrecipe), Tcl, Demo
16 Oct 2019 - An Amira-Avizo recipe to export to a CSV document which can be used in MS Excel for further analysis. Learn more