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- Gene Symbol
- CYP2D6
- Assay Reference Genome
Location
Chr.22:42127680 on build GRCh38- Cytoband
- 22q13.2
Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 1565 |
Gene Name: | cytochrome P450 family 2 subfamily D member 6 |
Gene Aliases: |
CPD6, CYP2D, CYP2D7AP, CYP2D7BP, CYP2D7P2, CYP2D8P2, CYP2DL1, CYPIID6, P450-DB1, P450C2D, P450DB1 |
Location: |
Chr.22:42125531-42130881 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CYP2D6 | NM_000106.5 | NP_000097.3 | ||
| NM_001025161.2 | NP_001020332.2 | |||
| XM_011529966.2 | XP_011528268.1 | |||
| XM_011529968.2 | XP_011528270.1 | |||
| XM_011529970.2 | XP_011528272.1 | |||
| XM_011529972.2 | XP_011528274.1 | |||
| AK309600.1 | 4 | 1272 | ||
| AY663390.1 | AAU87043.1 | |||
| BC066877.1 | AAH66877.1 | |||
| BC067432.1 | AAH67432.1 | |||
| BC075023.2 | AAH75023.1 | |||
| BC075024.2 | AAH75024.1 | |||
| BC106757.1 | AAI06758.1 | |||
| BC106758.1 | AAI06759.1 | |||
| BC126858.1 | ||||
| CK032845.1 | ||||
| CR456430.1 | CAG30316.1 | |||
| M20403.1 | AAA52153.1 | |||
| X07618.1 | ||||
| X08006.1 | CAA30807.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv3642 | Chr.22:42115497 - 42128296 on Build GRCh38 | Insertion |
 NDUFA6-AS1
CYP2D6
|
| dgv1319e212 | Chr.22:42126516 - 42145482 on Build GRCh38 | Gain |
CYP2D7
LOC102723722
CYP2D6
|
| esv6632 | Chr.22:42125966 - 42139888 on Build GRCh38 | Loss |
LOC102723722
CYP2D6
|
| esv3568417 | Chr.22:42126951 - 42144107 on Build GRCh38 | Loss |
CYP2D7
LOC102723722
CYP2D6
|
| nsv498989 | Chr.22:42123210 - 42135371 on Build GRCh38 | Loss |
NDUFA6-AS1
LOC102723722
CYP2D6
|
| esv2171396 | Chr.22:42125911 - 42139869 on Build GRCh38 | Deletion |
LOC102723722
CYP2D6
|
| nsv834210 | Chr.22:42057329 - 42209100 on Build GRCh38 | Loss |
SMDT1
TCF20
CYP2D7
NDUFA6
NAGA
NDUFA6-AS1
SNORD13P1
LOC102723722
CYP2D6
FAM109B
WBP2NL
|
| esv3575484 | Chr.22:42118886 - 42144107 on Build GRCh38 | Gain |
CYP2D7
NDUFA6-AS1
LOC102723722
CYP2D6
|
| esv27312 | Chr.22:42121254 - 42154514 on Build GRCh38 | Gain+Loss |
CYP2D7
NDUFA6-AS1
LOC102723722
CYP2D6
|
| nsv508737 | Chr.22:42052007 - 42134336 on Build GRCh38 | Insertion |
SMDT1
NDUFA6
NAGA
NDUFA6-AS1
SNORD13P1
LOC102723722
CYP2D6
FAM109B
WBP2NL
|
| nsv1110402 | Chr.22:42125795 - 42137591 on Build GRCh38 | Duplication |
LOC102723722
CYP2D6
|
| esv33893 | Chr.22:42126620 - 42142218 on Build GRCh38 | Gain+Loss |
CYP2D7
LOC102723722
CYP2D6
|
| nsv436350 | Chr.22:42125831 - 42135447 on Build GRCh38 | Deletion |
LOC102723722
CYP2D6
|
| esv2724275 | Chr.22:42123193 - 42141302 on Build GRCh38 | Deletion |
CYP2D7
NDUFA6-AS1
LOC102723722
CYP2D6
|
| nsv3641 | Chr.22:42099466 - 42146296 on Build GRCh38 | Deletion |
CYP2D7
NDUFA6-AS1
LOC102723722
CYP2D6
|
| nsv955164 | Chr.22:42122897 - 42144299 on Build GRCh38 | Deletion |
CYP2D7
NDUFA6-AS1
LOC102723722
CYP2D6
|
Back To TopMore Information
Important Information
Individuals may carry null alleles or extra copies of CYP2D6. Some CYP2D6 alleles contain sequences derived from the highly homologous CYP2D7 pseudogene. Hs04502391_cn specifically targets CYP2D6 intron 6 sequences and will not amplify CYP2D7 or CYP2D8 pseudogenes, but will amplify CYP2D6/CYP2D7 hybrid alleles carrying CYP2D6 intron 6 sequences (e.g. CYP2D6*36 contains conversion to CYP2D7 in exon 9).Additional Information:
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
Validated
|
Panther Classification:
Gene Ontology Categories:
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