Clariom™ D Array, human
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Applied Biosystems™

Clariom™ D Array, human

Accelerate your biomarker discovery from deep within the transcriptome with Clariom D Assays for human samples, the next generation ofRead more
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Catalog NumberQuantity
9029142 reactions
Catalog number 902914
Price (CNY)
1,000,000,000.00
Each
Add to cart
Quantity:
2 reactions
Price (CNY)
1,000,000,000.00
Each
Add to cart
Accelerate your biomarker discovery from deep within the transcriptome with Clariom D Assays for human samples, the next generation of transcriptome-level expression profiling tools. Clariom D Assays provide a highly detailed view of the transcriptome and offer the fastest path to the results you need for your research. Clariom D Assays allow translational research scientists to generate high-fidelity biomarker signatures quickly and easily. Based on industry-leading microarray technology, the novel design of these assays provides the most intricate transcriptome-wide gene- and exon-level expression profiles, including the ability to detect alternative splicing events of coding and long non-coding (lnc)RNA, in a single three-day experiment.

Expand your potential to discover novel, informative biomarkers
The number of known transcribed genes has expanded rapidly in recent years, providing more sources for actionable biomarkers, such as transcript variants and lncRNA, that can be used for clinical utility and advancing our understanding of disease mechanisms. Such biomarkers can be missed by lengthy, complex, and costly sequencing and targeted expression approaches, leading to irreproducible signatures and wasted time and money.

With full coverage of the transcribed genome including all known coding and non-coding splice variants, compatibility with clinical sample types, and flexible data analysis software, Clariom D assays are the premier tools for translational researchers performing complex expression biomarker discovery studies and wanting the fastest path to robust, clinically relevant, and actionable results.

Get all the data you need
• Rapidly identify complex disease signatures from >540,000 transcripts sourced from the largest number of public databases, the most comprehensive coverage of the human transcriptome available, to ensure biomarkers are not missed.
• Confidently detect genes, exons, and alternative splicing events that give rise to coding RNA and lncRNA isoforms.
• Detect rare and low-expressing transcripts otherwise not detected by common sequencing approaches.
• Go from data to insight in minutes with intuitive, highly visual, free analysis software.

When you have precious samples, get it right the first time
• Utilize RNA from various sample types including blood, cells, and fresh/fresh-frozen tissues.
• Preserve sample integrity and reduce data variability with an assay that does not require a globin or rRNA removal step.

Clariom D solutions are available in a single sample (cartridge array) format for use on the GeneChip™ 3000 instrument system and include reagents and fast, simple Transcriptome Analysis Console (TAC) software to analyze and visualize global expression patterns of genes, exons, pathways, and alternative splicing events.

Get the coverage you require, the reproducibility you need, and the insights you want to act on your discoveries.
For Research Use Only. Not for use in diagnostic procedures.
Specifications
IncludesClariom D 2 Arrays
Product LineApplied Biosystems™
Quantity2 reactions
Shipping ConditionApproved for shipment at Room Temperature or on Wet or Dry Ice
TypeD Array
ArrayTranscriptome Profiling
FormatArray Cartridge
Number of Arrays2 arrays
SpeciesHuman
Unit SizeEach
Contents & Storage
Clariom D 2 Arrays, human, store at 4°C

Frequently asked questions (FAQs)

What reagent kit should I use with my array?

Please refer to the Microarray Reagent Guide for Arrays and Expression Kits to match the correct reagents your array.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

Which fluidics script should I run with Clariom D arrays?

We recommend using Fluidics Script FS450_0001 for Clariom D arrays (Human, Mouse, Rat).

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

Why is it important to use Tough-Spots® labels when using GeneChip cartridge arrays?

Tough-Spots® labels are small adhesive stickers used to temporarily seal the backs of cartridge arrays during the overnight hybridization step. They are required to prevent loss of volume due to evaporation through the septa. We recommend using Tough-Spots® labels on Rolls from USA Scientific (Item No. 9185-0000)

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

What are the respective hybridization volumes based on array format for Affymetrix gene expression arrays?

Proper hybridization volume is critical to obtaining an even signal across a given array. Too little volume can lead to black circles in the middle of the array. Too much volume can leak out of the back of the array. The correct hybridization volume leaves enough room for a small air bubble to circulate around the array surface during the overnight hybridization. Here are the recommended hybridization and fill volumes based on the array format:
Array Format; Hybridization Volume; Fill Volume
- 49 Format (Standard); 200 µL; 250 µL
- 64 Format; 200 µL; 250 µL
- 100 Format (Midi); 130 µL; 160 µL
- 169 Format (Mini); 80 µL; 100 µL
- 400 Format (Micro); 80 µL; 100µL

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

How are transcript IDs assigned for WT arrays if a gene has multiple transcript IDs?

The first assigned mRNA/gene that is listed in the annotation file for a given probe set or transcript cluster is considered the "best" assignment based on data source quality ranking and assignment scoring system. To get a single best mRNA/gene assignment you can simply take the first one in the list in the annotation file.

Sometimes, there might be multiple best hits between transcript clusters (or probe set) and a mRNA/gene, with identical score and data source quality. In that case, the transcript assignments are ranked based on their descriptions (e.g., title from the GenBank record).

For transcript clusters that detect genes that are alternatively spliced, the different spliced forms will be ranked by length with the longest ones listed first.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.