SimplyBlue™ SafeStain, 1 L - FAQs

View additional product information for SimplyBlue™ SafeStain - FAQs (LC6060, LC6065)

52 product FAQs found

转印后的膜能否用胶体蓝(G-250)染色试剂盒进行染色?

不能。我们不建议使用胶体蓝(G-250)染色试剂盒对膜进行染色,因为这会产生很高的背景。更好的染色方法包括:

1.Invitrogen可逆性膜蛋白质染料(货号IB7710):可对硝化纤维素膜和PVDF膜上的蛋白质进行完整的可逆性染色。该产品的灵敏度高于丽春红S(在10分钟内检测到蓝色条带上<10 ng的BSA),可在5分钟内实现可逆性染色。免疫印迹检测不受染色和清除染料过程的影响,在某些情况下可达到更高的灵敏度。
2.Coomassie(非胶体)染色:使用溶于50%甲醇的0.1% Coomassie Blue R-250染色5分钟,然后用50%甲醇和10%乙酸洗涤多次进行脱色。用水洗涤多次、风干并在-20℃下保存,最长可保存12个月。灵敏度约为50-100 ng。
3.SimplyBlue SafeStain染液。SimplyBlue SafeStain使用手册中有对干燥PVDF膜进行染色的实验方案,但不推荐将其用于湿润的PVDF膜或硝化纤维素膜,因为会产生较高的背景。
4.酰胺黑染液:与Coomassie相同,但灵敏度更低。请参见使用手册中的实验方案。
5.丽春红S染液:与Coomassie相同,但灵敏度更低。请参见使用手册中的实验方案。
6.紫外透照法:转印后,将膜放在滤纸上,在室温下干燥10分钟。在20%甲醇中润湿,在湿润状态下于白光前观察印迹;条带会比膜看起来更透明。如果条带随膜变干而消失,则再次润湿膜。

我能否在免疫印迹分析前,使用胶体蓝染料对凝胶进行染色?

可以,胶体蓝染料可在免疫印迹前使用。但是,为得到理想的转印效率,我们建议进行凝胶脱色处理,然后在一系列Tris 碱/甘氨酸/SDS溶液中平衡,增加染料的溶解;转印完成时,应使用甲醇处理膜,从而在之前去除染料[从而在化学发光显影前去除染料](不需要在化学发光检测前进行脱色处理)。

使用SimplyBlue SafeStain对IEF凝胶染色时,得到了染色剂聚集物/沉淀。问题出在哪里?

这可能与TCA未被洗干净有关,因为TCA会降低溶液的pH,引起染色剂聚集。我们建议先用大量水洗涤2次,每次5分钟,最后再用水洗涤1小时以上(如果需要,可以洗涤过夜)。或者,也可以使用过量的SimplyBlue SafeStain进行染色。

胶体蓝染料和SimplyBlue SafeStain中的Coomassie Blue G250与Coomassie R250有何区别?

Coomassie G250比Coomassie R250更灵敏,而Coomassie R250比Coomassie G250的染色速度更快。

我能否使用SimplyBlue SafeStain对PVDF膜进行染色,然后将膜用于蛋白质测序?

您可以使用SimplyBlue SafeStain对PVDF膜进行染色,以检测待测序的蛋白质。在检测后和测序前,使用20–30%乙醇洗涤膜,除去残留的染料。

对于经过SimplyBlue SafeStain染色的凝胶,我想使用SYPRO Ruby蛋白质凝胶染料再次染色。染色的最佳停止点是什么?

我们建议将凝胶放在染料中过夜。根据使用手册的建议,无需额外加入盐溶液,因为无需担心缓冲液盐和SDS,而且这样做会抑制多度染色。

我能否从凝胶中分离出经过SimplyBlue SafeStain染色的抗体条带,并将其注射到动物体内?

可以使用经SimplyBlue SafeStain染色的蛋白质条带进行免疫。凝胶的染色和脱色过程应除去SDS(如果使用了SDS PAGE凝胶),从而避免SDS与弗氏佐剂发生相互作用。

在制备抗体时,如果对蛋白质进行染色和检测,然后直接将蛋白质剪切下来并注射,那么SimplyBlue SafeStain是否会影响抗体反应?

我们建议通过电洗脱或乙醇处理使蛋白质与Coomassie G250染料分离,避免Coomassie G250产生的不正当免疫反应。如果抗体是用于膜的免疫检测,那么,皮下注射膜结合的条带,会产生特别适用于膜检测的抗体。

为什么SimplyBlue SafeStain是一种“安全”的染料?

SimplyBlue SafeStain是经过专业设计的安全、无害染料。它不含有甲醇或乙酸,也无需使用必须作为有害废物进行处理的甲醇或乙酸。

你们是否推荐在SimplyBlue SafeStain染色前采用酒精/乙酸固定?

SimplyBlue SafeStain不含乙酸或甲醇。在使用SimplyBlue SafeStain染色前使用酒精/乙酸固定步骤是不需要或不推荐的。

我想对蛋白质进行质谱(MS)分析。能否使用SimplyBlue SafeStain进行蛋白质染色?

使用SimplyBlue SafeStain染色的蛋白质,可以用于质谱(MS)分析。

我能否使用SimplyBlue SafeStain对膜进行染色?

SimplyBlue SafeStain可用于干燥PVDF膜的染色。用于硝化纤维素膜和湿润PVDF膜的染色,会产生高背景,因此不推荐使用。

SimplyBlue SafeStain的检测灵敏度是多少?

使用常规染色方案时,脱色后可检测到7 ng的BSA。使用微波染色方案时,可检测到5 ng的BSA。

SimplyBlue SafeStain是否含有Coomassie G250或Coomassie R250?

SimplyBlue SafeStain是一种即用型专有染色溶液,含有Coomassie G250。该产品不含乙酸或甲醇。

SimplyBlue SafeStain应如何保存?保质期是多久?

我们推荐在室温下保存SimplyBlue SafeStain,在此温度下可以从收货之日起稳定保存1年。

我想通过密度测定法进行蛋白质定量。SimplyBlue SafeStain是最佳的染料吗?

通过密度测定法进行蛋白质定量时,您可选择使用SimplyBlue SafeStain。但是,胶体蓝染色试剂盒(货号LC6025)最适用于该应用。

Can I use the Colloidal Blue Staining Kit (Cat. No. LC6025) for membrane staining to detect proteins that are transferred to a membrane?

It is not recommended because the background will be too high. Better alternatives include: 1) Invitrogen Reversible Membrane Protein Stain Kit (Cat. No. IB7710).

2) Coomassie (non-colloidal) staining: stain in 0.1% Coomassie Blue R-250 in 50% methanol for 5 min and destain with several changes of 50% methanol and 10% acetic acid. Rinse with several changes of water, air dry and store for up to 12 months at -20°C. Sensitivity is approximately at the 50-100 ng level.

3) Use SimplyBlue SafeStain (Cat. No. LC6060). The SimplyBlue SafeStain manual has the protocol for staining PVDF membranes, but it is not recommended for nitrocellulose because of high background.

4) Amido Black: same as Coomassie but less sensitive.

5) Ponceau S: same as Coomassie but less sensitive.

6) UV transillumination: place membrane on filter paper after blot is finished and allow to dry at room temperature for about 10 min. Rewet in 20% methanol and view the blot in front of white light while it is still wet; the bands will look more translucent than the membrane. If the bands disappear as the membranes dries, rewet again.

Find additional tips, troubleshooting help, and resources within our Protein Electrophoresis and Western Blotting Support Center.

Why is Coomassie G-250 used as the tracking dye in NuPAGE LDS Sample Buffer instead of bromophenol blue?

Coomassie G-250 will give a sharp dye front with both NuPAGE MES and MOPS Running Buffers and is therefore used as the tracking dye in the NuPAGE LDS Sample Buffer.

Bromophenol blue runs more slowly than some peptides with the NuPAGE MES Running Buffer system.

Coomassie G-250 migrates much closer to the moving ion front than bromophenol blue, ensuring that small peptides will not be run too far (e.g., off the gel).

Find additional tips, troubleshooting help, and resources within our Protein Electrophoresis and Western Blotting Support Center.

Is the SimplyBlue SafeStain the appropriate stain for quantitation by densitometry?

The Colloidal Blue Staining Kit (Cat. No. LC6025) is best for quantitation by densitometry. You can also use SimplyBlue SafeStain for this application.

The great advantage of SimplyBlue SafeStain is that it is very easy to use and safe.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

The sensitivity of my SimplyBlue SafeStain seems to be decreasing over time. Why is this?

Check the cap on the bottle. If the bottles are not tightly sealed, the alcohol can evaporate from the stain causing substantial decrease in stain sensitivity.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

How do I destain proteins on a PVDF membrane that were stained with SimplyBlue SafeStain?

After staining with SimplyBlue SafeStain, use deionized water for the less strongly retained protein bands on the PVDF membrane.

Increasing methanol or ethanol concentrations up to 70% should destain any remaining bands. You can leave the membrane in the destain indefinitely.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

How can membranes be stained?

Membranes cannot be stained with Colloidal Blue, the background will be too high. Better alternatives include:

1) Coomassie (non-colloidal) staining: Stain in 0.1% Coomassie Blue R-250 in 50% methanol for 5 min and destain with several changes of 50% methanol and 10% acetic acid. Rinse with several changes of water, air dry and store for up to 12 months at -20°C. Sensitivity is approximately at the 50-100 ng level.

2) SimplyBlue SafeStain. There is a protocol included in the SimplyBlue manual for staining PVDF but it is not recommended for nitrocellulose because of the high background.

3) Amido Black: less sensitive than Coomassie Blue.
Recipe for amido black: (1L) 450 mL methanol, 450 mL dH2O, 100 mL glacial acetic acid, 0.1 g amido black.
Procedure: combine ingredients and stir until the amido black is dissolved. If the membrane has dried up, pre-wet by floating on dH2O and soaking for 5 min. Transfer to tray containing amido black for 5-10 min. Wash in several changes of dH2O.

4) Ponceau S: less sensitive than Coomassie Blue.
Recipe for Ponceau S (10X stock): 2 g Ponceau S, 30 g trichloroacetic acid, 30 g sulfosalicylic Acid, dH2O to 100 mL
Combine ingredients and stir until Ponceau S is dissolved. Dilute 1:10 before using.
Procedure: If membrane has dried up, pre-wet membrane by floating on dH2O and soaking for 5 min. Transfer membrane to tray containing Ponceau S and incubate for 5-10 min. Wash membrane in several changes of dH2O.

5) UV transillumination: Place membrane on filter paper after blot is finished and allow to dry at room temperature for about 10 min. Rewet in 20% methanol and view the blot in front of white light while it is still wet; the bands will look more translucent than the membrane. If the bands disappear because they dry, rewet again.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

What is the sensitivity of Coomassie staining and silver staining?

Coomassie sensitivity: 50-500 ng protein per band
Silver-staining sensitivity: 1-5 ng protein per band
In general, silver staining is 10-100 times more sensitive than Coomassie staining.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

What conditions are expected to remove Coomassie stain from proteins?

The Coomassie dye binds to the protein via hydrophobic interactions, so anything that can disrupt these interactions can potentially serve to remove the dye.

For mild removal conditions, try nonionic detergents such as Triton X-100. If harsher conditions are acceptable, organic solvents like acetonitrile or alcohols should be effective.

Many times, washing with 30% ethanol will remove the stain. Changing the pH or salt concentration is not expected to help.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

When staining IEF gels with the Colloidal Blue Staining Kit, is it necessary to use the fixing solution?

Yes, the fix serves two purposes: it fixes the sample in the IEF gel and it helps to remove gel background.

If you do not use the fixing solution, the background on the gels will be high and detection will be less sensitive.

High background is caused by ampholytes remaining in the gel.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can I stain with Colloidal Blue and then Western blot?

Yes, either Coomassie or Colloidal Blue stain can be used before Western blotting.

However, for optimal transfer efficiency, destain the gel and then equilibrate in a series of Tris base/Glycine/SDS solutions to increase solubility;

When the transfer is complete, the membrane is treated with methanol to remove the stain prior to chromogenic development (not necessary prior to chemilumninescent detection). Review Current Protocols in Molecular Biology Unit 10.8.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Why does a precipitate sometimes form when Colloidal Blue Stainers A and B are mixed together?

The precipitate is caused by a temporary high concentration of one of the components in a localized area.

Gentle mixing of the solution allows the precipitate to go into solution.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

What are the blue particles in the Stainer B solution (Colloidal Blue)?

The blue particles are called colloids. They are what enables the kit to work effectively.

Just remember to shake the solution well before using to evenly distribute them throughout the bottle.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can the Colloidal Blue Staining kit be stored in the refrigerator or freezer?

The Colloidal Blue Staining kit can be stored in the refrigerator, but be sure to let the kit return to room temperature before use.

Also, remember to shake the Stainer B reagent prior to use. Cold storage will not enhance the shelf-life of the stain.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Will the Colloidal Blue Staining Kit stain nucleic acids?

No, due to its chemistry, the Colloidal Blue staining kit only stains proteins and peptides.

Why does the Colloidal Blue Staining Kit appear less intense than standard Coomassie stain?

The Colloidal Blue Staining Kit uses G-250 Coomassie whereas standard Coomassie staining protocols use R-250.

The G-250 is a turquoise color whereas R-250 is closer to navy blue. The difference is in the shade of color, rather than the intensity.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Does the Colloidal Blue Staining kit work with Invitrogen Zymogram gels?

Yes, the Colloidal Blue Staining kit works very well with Invitrogen Zymogram gels.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

What reduces precipitation of the Colloidal Blue Staining on gels that are a variation of Ralph Reisfled's "Acid-Urea" gels (6M Urea, 2% Triton X-100, 5% acetic acid), when following the NuPAGE Invitrogen Bis-Tris gel protocol?

These gels are for basic proteins, where they will migrate to the cathode. The interfering substances are urea and Triton X-100.

To improve results, the gels can be rinsed three times (5 min each) with water after the methanol/acetic acid fix step, before adding the staining solution.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

How can the Colloidal Blue Staining Kit or SimplyBlue SafeStain be completely removed from the protein for analysis using mass spectrometry?

The G-250 coomassie dye is very soluble in alcohol. To remove all of the stain, incubate the gel in a 10-30% ethanol solution for approximately 15 min or until clear. Rinse and rehydrate the gel in pure water and proceed from there.

In the Colloidal Blue Staining kit manual, it is recommended to incubate the stained gel in GelDry (a 30% alcohol solution) for only 5 min as opposed to the normal 15 min because a 15 min incubation would completely "bleach" the gel.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Does SimplyBlue SafeStain require methanol or acetic acid fixatives or destains?

SimplyBlue SafeStain is completely non-hazardous and does not require methanol or acetic acid fixatives or destains. Risk of hazardous exposure and unpleasant odors are eliminated.

Find additional tips, troubleshooting help, and resources within our Protein Electrophoresis and Western Blotting Support Center.

Can I stain my gel overnight using SimplyBlue SafeStain?

If you need to leave the gel overnight in the stain, add 2 mL of 20% NaCl (w/v) in water for every 20 mL of stain. This procedure will not affect sensitivity.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can membranes be stained with the Colloidal Blue (G-250) Staining Kit after blotting?

No we do not recommend staining membranes with the Colloidal Blue (G-250) Staining Kit as the background will be too high. Better alternatives include:

- Invitrogen Reversible Membrane Protein Stain (Cat. No. IB7710): Allows for complete, reversible staining of protein on nitrocellulose & PVDF membranes. Sensitivity is higher than Ponceau S (<10 ng of BSA in 10 mins as blue bands) and the staining is reversible in 5 minutes. Western blot detection is unaffected by the staining and erasing process, and in some cases higher sensitivity is achieved.
- Coomassie (non-colloidal) staining: Stain in 0.1% Coomassie Blue R-250 in 50% methanol for 5 minutes and destain with several changes of 50% methanol and 10% acetic acid. Rinse with several changes of water, air dry and store for up to 12 months at −20 degrees C. Sensitivity is approximately at the 50-100 ng level.
- SimplyBlue SafeStain. There is a protocol included in the SimplyBlue SafeStain manual for staining dry PVDF membranes but it is not recommended for wet PVDF membranes or nitrocellulose because of the high background.
- Amido black: same as Coomassie stain but less sensitive. Please see protocol in the manual (https://tools.thermofisher.com/content/sfs/manuals/invitrolonpvdf_man.pdf).
- Ponceau S: same as Coomassie stain but less sensitive. Please see protocol in the manual (https://tools.thermofisher.com/content/sfs/manuals/invitrolonpvdf_man.pdf).
- UV transillumination: After blotting, place the membrane on a filter paper and allow to air-dry at room temperature for about 10 minutes. Rewet in 20% methanol and view the blot in front of white light while it is still wet; the bands will look more translucent than the membrane. If the bands disappear because the membrane is dry, rewet the membrane.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can I stain my gel with Colloidal Blue Stain and then perform western blotting?

Yes, Colloidal Blue Stain can be used before western blotting. However, for optimal transfer efficiency, we recommend destaining the gel and then equilibrating in a series of Tris base/Glycine/SDS solutions to increase solubility; when the transfer is complete, the membrane should be treated with methanol to remove the stain prior to chromogenic development (not necessary prior to chemiluminescent detection).

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

I used the SimplyBlue SafeStain with IEF gels and got aggregation/precipitation of the stain. What went wrong?

The problem is related to the TCA not being rinsed off as it lowers the pH of the solution and causes aggregation of the stain. We recommend washing in large volumes of water, twice for 5 minutes each and performing the last wash for at least an hour (can even go overnight if needed). Another recommendation is to use excess amount of SimplyBlue SafeStain.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

What is the difference between Coomassie Blue G250 found in the Colloidal Blue Stain and SimplyBlue SafeStain, and Coomassie R250?

Coomassie G250 is more sensitive than Coomassie R250 whereas Coomassie R250 stains faster than Coomassie G250.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can I use SimplyBlue SafeStain to stain a PVDF for subsequent protein sequencing?

You can use SimplyBlue SafeStain to stain the PVDF membrane to detect your protein to be sequenced. After detection and prior to sequencing, rinse the membrane in 20-30% ethanol to remove the remaining stain.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

I would like to use SYPRO Ruby Protein Gel Stain to stain a gel that has been stained with SimplyBlue SafeStain. What is the best stopping point during staining?

We recommend leaving the gel in the stain overnight. There is no need to add the extra salt solution as recommended in the manual because there are no buffer salts and SDS to worry about, and that would end up inhibiting the staining too much.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can I isolate an antibody band out of a gel that has been stained with SimplyBlue SafeStain and use it for injection into animals?

There should be no problem with using a SimplyBlue stained protein band for immunization. The process of staining and destaining the gel should remove SDS (if an SDS PAGE gel is used) so it will not interact with the Freund's Adjuvant.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

During the making of antibodies, will the SimplyBlue SafeStain affect the response of an antibody if the proteins are stained for detection and then directly excised and injected?

Our recommendation would be to separate the protein from the Coomassie G250 stain by electroelution or alcohol treatment so as to not illicit an immune response to the Coomassie G250. If the antibodies are to be used in membrane-based immunodetection, then inserting the membrane-bound band subcutaneously can produce antibodies that work especially well in membrane-based detection.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Why is SimplyBlue SafeStain a "safe" stain?

SimplyBlue Safestain is specially designed for safe, non-hazardous disposal. It does not contain methanol or acetic acid and does not require the use of methanol or acetic acid which must be disposed of as hazardous waste.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Do you recommend performing an alcohol/acetic acid fixing step prior to staining with SimplyBlue SafeStain?

SimplyBlue SafeStain does not contain acetic acid or methanol. An alcohol/acetic acid fixing step prior to staining with SimplyBlue SafeStain is not required or recommended.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

I would like to send my protein for mass spectrometry (MS) analysis. Can I stain my protein with SimplyBlue SafeStain?

Proteins stained using the SimplyBlue SafeStain are compatible with mass spectrometry (MS) analysis.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Can I use SimplyBlue SafeStain to stain membranes?

SimplyBlue SafeStain can be used to stain dry PVDF membranes. Staining nitrocellulose and wet PVDF membranes results in high background and is not recommended.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

What is the sensitivity of detection with SimplyBlue SafeStain?

With the regular staining protocol, 7 ng of BSA can be detected after destaining whereas with the microwave staining protocol, 5 ng of BSA can be detected.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

Does SimplyBlue SafeStain contain Coomassie G250 or Coomassie R250?

SimplyBlue SafeStain is a ready-to-use proprietary staining solution that contains Coomassie G50. It does not contain acetic acid or methanol.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

How should I store the SimplyBlue SafeStain and what is its shelf life?

We recommend storing the SimplyBlue SafeStain at room temperature where it is stable for one year from date of shipment.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.

I would like to perform protein quantitation by densitometry. Is SimplyBlue SafeStain the best stain to use?

You can use the SimplyBlue SafeStain for protein quantitation by densitometry. However, the Colloidal Blue Staining Kit (Cat. No. LC6025) is the best suited for this application.

Find additional tips, troubleshooting help, and resources within our Protein Assays and Analysis Support Center.