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- SNP ID:
- rs138213197
- Gene
-
HOXB13MIR3185PRAC1PRAC2 - Gene Name
- Set Membership:
- > Qualified
- Chromosome Location:
- Chr.17: 48728343 - 48728343 on Build GRCh38
- Polymorphism:
- C/T, Transition substitution
- Context Sequence [VIC/FAM]:
CACTCGGCAGGAGTAGTACCCGCCT[C/T]CAAAGTAACCATAAGGCACGGGAGC
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 604607
MIM: 609819
MIM: 610787
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Literature Links: |
HOXB13 PubMed Links | ||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
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AMR
|
| HOXB13 - homeobox B13 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_006361.5 | 407 | Missense Mutation | GAA,GGA | E,G 84 | NP_006352.2 | |
| MIR3185 - microRNA 3185 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
| PRAC1 - prostate cancer susceptibility candidate 1 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
| PRAC2 - prostate cancer susceptibility candidate 2 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
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Qualified