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- SNP ID:
- rs775247236
- Gene
-
ATG4APSMD10 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.X: 108094674 - 108094674 on Build GRCh38
- Polymorphism:
- A/G, Transition substitution
- Context Sequence [VIC/FAM]:
AAGTACCACATTCTTATCATACACT[A/G]TCCTCAAACATGATTTTAATTGAGC
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 300663
MIM: 300880
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Literature Links: |
ATG4A PubMed Links | ||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
| ATG4A - autophagy related 4A cysteine peptidase | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001321287.1 | Intron | NP_001308216.1 | ||||
| NM_001321288.1 | Intron | NP_001308217.1 | ||||
| NM_001321289.1 | Intron | NP_001308218.1 | ||||
| NM_001321290.1 | Intron | NP_001308219.1 | ||||
| NM_052936.4 | Intron | NP_443168.2 | ||||
| NM_178270.3 | Intron | NP_840054.1 | ||||
| NM_178271.2 | Intron | NP_840055.1 | ||||
| XM_011530841.2 | Intron | XP_011529143.1 | ||||
| XM_011530842.1 | Intron | XP_011529144.1 | ||||
| PSMD10 - proteasome 26S subunit, non-ATPase 10 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
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