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SNP ID:
rs6971
Gene
TSPO TTLL12
Gene Name
Set Membership:
> HapMap
Chromosome Location:
Chr.22: 43162920 - 43162920 on Build GRCh38
Polymorphism:
A/G, Transition substitution
Context Sequence [VIC/FAM]:

CCCCTACCTGGCCTGGCTGGCCTTC[A/G]CGACCACACTCAACTACTGCGTATG

Assay ID C___2512465_20
Size
Availability Made To Order
Catalog # 4351379
Price
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 109610

Literature Links:

 TSPO PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
T (0.17)
(0.83)
Caucasian - Not Available CEPH (CEU)
T (0.29)
(0.71)
EAS
T (0.05)
(0.95)
African American - Not Available YRI (Yoruba)
T (0.11)
(0.89)
SAS
T (0.14)
(0.86)
Chinese - Not Available JPT (Japanese)
T (0.04)
(0.96)
AFR
T (0.17)
(0.83)
Japanese - Not Available CHB (Han Chinese)
T (0.01)
(0.99)
EUR
T (0.34)
(0.66)
AMR
T (0.15)
(0.85)
TSPO - translocator protein
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_000714.5 559 Missense Mutation ACG,GCG T,A 147 NP_000705.2
NM_001256530.1 559 Missense Mutation ACG,GCG T,A 147 NP_001243459.1
NM_001256531.1 559 Missense Mutation ACG,GCG T,A 147 NP_001243460.1
TTLL12 - tubulin tyrosine ligase like 12
There are no transcripts associated with this gene.

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More Information


Set Membership:

 HapMap

Gene Ontology Categories:

Function(s) Process(es)


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