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- Gene Symbol
- SPECC1L
- Assay Reference Genome
Location
Chr.22:24370183 on build GRCh38- Cytoband
- 22q11.23
Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 23384 |
Gene Name: | sperm antigen with calponin homology and coiled-coil domains 1 like |
Gene Aliases: |
CYTSA, GBBB2, OBLFC1 |
Location: |
Chr.22:24270817-24417740 on Build GRCh38 |
Assay Gene Location: | Within Intron 16 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SPECC1L | NM_001145468.3 | NP_001138940.3 | ||
| NM_001254732.2 | NP_001241661.2 | |||
| NM_001254733.1 | NP_001241662.1 | |||
| NM_015330.4 | NP_056145.4 | |||
| AB002374.1 | BAA21574.1 | |||
| AK025531.1 | ||||
| AK301482.1 | ||||
| AL832425.1 | CAH10609.1 | |||
| AY884293.1 | AAX84184.1 | |||
| BC136471.1 |
Target Gene Details
Entrez Gene ID: | 101730217 |
Gene Name: | SPECC1L-ADORA2A readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.22:24270817-24442360 on Build GRCh38 |
Assay Gene Location: | Within Intron 15 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SPECC1L-ADORA2A | NR_103546.1 | |||
| AB209022.1 | BAD92259.1 | |||
| GR939218.1 | ||||
| GR939229.1 | ||||
| GR939241.1 | ||||
| GR939262.1 | ||||
| GR939274.1 | ||||
| GR939286.1 | ||||
| GR939298.1 | ||||
| GR939310.1 | ||||
| GR939322.1 | ||||
| GR939334.1 | ||||
| GR939358.1 | ||||
| GR939370.1 | ||||
| GR939382.1 | ||||
| GR939394.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2724068 | Chr.22:24288741 - 24669870 on Build GRCh38 | Deletion |
 GGT1
SNRPD3
ADORA2A
LRRC75B
BCRP3
SPECC1L-ADORA2A
GUCD1
UPB1
POM121L10P
ADORA2A-AS1
SPECC1L
|
| dgv8039n54 | Chr.22:23323169 - 24601506 on Build GRCh38 | Gain |
MIF-AS1
ADORA2A
LRRC75B
GGT5
SUSD2
GSTT2
MMP11
LOC101929374
SMARCB1
MIF
DDTL
DERL3
CES5AP1
GGT1
LOC100652871
LOC107985555
SPECC1L-ADORA2A
IGLL1
LOC107985559
SPECC1L
VPREB3
RGL4
SNRPD3
LOC388882
DRICH1
GUSBP11
UPB1
POM121L9P
DDT
SLC2A11
C22orf15
CHCHD10
GSTT2B
GSTTP1
PCAT14
CABIN1
ZDHHC8P1
GUCD1
ZNF70
ADORA2A-AS1
|
| nsv1057819 | Chr.22:24290518 - 24624081 on Build GRCh38 | Gain |
GGT1
SNRPD3
ADORA2A
LRRC75B
SPECC1L-ADORA2A
GUCD1
UPB1
ADORA2A-AS1
SPECC1L
|
| nsv526567 | Chr.22:23348138 - 24600663 on Build GRCh38 | Gain |
MIF-AS1
ADORA2A
LRRC75B
GGT5
SUSD2
GSTT2
MMP11
LOC101929374
SMARCB1
MIF
DDTL
DERL3
CES5AP1
GGT1
LOC100652871
LOC107985555
SPECC1L-ADORA2A
IGLL1
LOC107985559
SPECC1L
VPREB3
RGL4
SNRPD3
LOC388882
DRICH1
GUSBP11
UPB1
POM121L9P
DDT
SLC2A11
C22orf15
CHCHD10
GSTT2B
GSTTP1
PCAT14
CABIN1
ZDHHC8P1
GUCD1
ZNF70
ADORA2A-AS1
|
| esv2724041 | Chr.22:23315914 - 24669376 on Build GRCh38 | Deletion |
MIF-AS1
ADORA2A
LRRC75B
GGT5
SUSD2
GSTT2
MMP11
LOC101929374
SMARCB1
MIF
POM121L10P
DDTL
DERL3
CES5AP1
GGT1
LOC100652871
LOC107985555
BCRP3
SPECC1L-ADORA2A
IGLL1
LOC107985559
SPECC1L
VPREB3
RGL4
SNRPD3
LOC388882
DRICH1
GUSBP11
UPB1
POM121L9P
DDT
SLC2A11
C22orf15
CHCHD10
BCR
GSTT2B
GSTTP1
PCAT14
CABIN1
ZDHHC8P1
GUCD1
ZNF70
ADORA2A-AS1
|
| nsv1055830 | Chr.22:24005071 - 24643213 on Build GRCh38 | Gain |
SNRPD3
ADORA2A
LRRC75B
GGT5
SUSD2
UPB1
POM121L9P
GGT1
GSTTP1
CABIN1
BCRP3
SPECC1L-ADORA2A
GUCD1
ADORA2A-AS1
SPECC1L
|
| esv3893463 | Chr.22:24009046 - 24601506 on Build GRCh38 | Gain |
SNRPD3
ADORA2A
LRRC75B
GGT5
SUSD2
UPB1
POM121L9P
GGT1
CABIN1
SPECC1L-ADORA2A
GUCD1
ADORA2A-AS1
SPECC1L
|
| dgv4528n100 | Chr.22:23322244 - 24682765 on Build GRCh38 | Gain |
MIF-AS1
ADORA2A
LRRC75B
GGT5
SUSD2
GSTT2
MMP11
LOC101929374
SMARCB1
MIF
POM121L10P
DDTL
DERL3
CES5AP1
GGT1
LOC100652871
LOC107985555
BCRP3
SPECC1L-ADORA2A
IGLL1
LOC107985559
SPECC1L
VPREB3
RGL4
SNRPD3
LOC388882
DRICH1
GUSBP11
UPB1
POM121L9P
DDT
SLC2A11
C22orf15
CHCHD10
GSTT2B
GSTTP1
PCAT14
CABIN1
ZDHHC8P1
GUCD1
ZNF70
ADORA2A-AS1
|
| nsv588744 | Chr.22:24285587 - 24617379 on Build GRCh38 | Gain |
GGT1
SNRPD3
ADORA2A
LRRC75B
SPECC1L-ADORA2A
GUCD1
UPB1
ADORA2A-AS1
SPECC1L
|
| esv3575443 | Chr.22:23348201 - 24670505 on Build GRCh38 | Gain |
MIF-AS1
ADORA2A
LRRC75B
GGT5
SUSD2
GSTT2
MMP11
LOC101929374
SMARCB1
MIF
POM121L10P
DDTL
DERL3
CES5AP1
GGT1
LOC100652871
LOC107985555
BCRP3
SPECC1L-ADORA2A
IGLL1
LOC107985559
SPECC1L
VPREB3
RGL4
SNRPD3
LOC388882
DRICH1
GUSBP11
UPB1
POM121L9P
DDT
SLC2A11
C22orf15
CHCHD10
GSTT2B
GSTTP1
PCAT14
CABIN1
ZDHHC8P1
GUCD1
ZNF70
ADORA2A-AS1
|
| nsv834160 | Chr.22:24329972 - 24507687 on Build GRCh38 | Gain |
ADORA2A
SPECC1L-ADORA2A
UPB1
ADORA2A-AS1
SPECC1L
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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