Assay Details

Gene Symbol: CDKN1B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004064.4	NP_004055.1	1 - 2	1048		71
GenBank mRNA	AB451291.1	-	1 - 2	478		71
	AB451423.1	-	1 - 2	478		71
	AF247551.1	-	1 - 2	478		71
	AK298335.1	-	2 - 3	567		71
	AK312461.1	-	1 - 2	953		71
	AY004255.1	-	1 - 2	630		71
	BC001971.1	-	1 - 2	855	3458141	71
	BT019553.1	-	1 - 2	478		71
	BT019554.1	-	1 - 2	478		71
	CR457399.1	-	1 - 2	478		71
	U10906.1	-	1 - 2	478		71

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200006888.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000178.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Immune Tolerance Network

Mammalian Gene Collection

Endogenous Controls

Recommended Assay

Homo sapiens

Human MAP Kinase Pathways

Human Signal Transduction Pathways

HUMAN CYCLINS AND CELL CYCLE REGULATION

HUMAN MOLECULAR MECHANISMS OF CANCER

HUMAN ENDOGENOUS CONTROL FAST PLATE

HUMAN BREAST CANCER REGULATION BY STATHMIN1

HUMAN PI3K SIGNALING

HUMAN PANCREATIC ADENOCARCINOMA

Inventoried

Human_Map_Kinase

Human_Signal_Transduction_Pathways

Human_Pancreatic_Adenocarcinoma

Human_Endogenous_Controls

Human_Molecular_Mechanisms_of_Cancer

Human_Cyclins_and_Cell_Cycle_Regulation

Human_PI3K_Signaling

Human_Breast_Cancer_Regulation_by_Stathmin1

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDKN1B

Panther Classification:

Molecular Function -

kinase inhibitor

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12002244.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002244.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002244.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002251.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002251.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002251.hg.1	ENST00000535674.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002251.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002251.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002252.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002252.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002252.hg.1	ENST00000535674.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002252.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002252.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002246.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002246.hg.1	ENST00000535674.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002246.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002246.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002250.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002250.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002250.hg.1	ENST00000535674.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002250.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002250.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002248.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002248.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002248.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002248.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002247.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002247.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002247.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002249.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002249.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002249.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002249.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12002253.hg.1	ENST00000228872.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002253.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002253.hg.1	ENST00000535674.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12002253.hg.1	NM_004064.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12002253.hg.1	TC12000178.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200148120.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148120.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148120.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148120.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148120.hg.1	TC1200006888.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200148118.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148118.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148118.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148118.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148118.hg.1	TC1200006888.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148125.hg.1	TC1200006888.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200148119.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148119.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148119.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148119.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148119.hg.1	TC1200006888.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148124.hg.1	TC1200006888.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	ENST00000477087.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	TC1200006888.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	ENST00000228872.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	ENST00000396340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	ENST00000442489.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	NM_004064.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200148123.hg.1	TC1200006888.hg.1	Clariom D TC

Citations (1)

Hyaluronan and CD44 antagonize mitogen-dependent cyclin D1 expression in mesenchymal cells.

Authors: Kothapalli D, Zhao L, Hawthorne EA, Cheng Y, Lee E, Pure E, Assoian RK
Journal: J Cell Biol - Page No 535 (Mon Feb 12 00:00:00 EST 2007)
Volume (Year): 176 (2007)
Product Usage: -

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map