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- Gene Symbol:
-
Upf3a - Gene Name:
- UPF3 regulator of nonsense transcripts homolog A (yeast)
- Gene Aliases:
- 2600001C03Rik, 4930546M19Rik, RENT3A, UPF3
- Chromosome Location:
- Chr.8: 13785215 - 13798538 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Upf3a | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_025924.2 | NP_080200.1 | 3 - 4 | 481 | 77 | |
| GenBank mRNA | AK011127.1 | - | 3 - 4 | 458 | 77 | |
| AK016053.1 | - | 3 - 4 | 444 | 77 | ||
| AK020823.1 | - | 3 - 4 | 485 | 77 | ||
| AK033239.1 | - | 3 - 4 | 462 | 77 | ||
| AK145471.1 | - | 438 | 77 | |||
| BC116988.1 | - | 3 - 4 | 481 | 40126307 | 77 | |
| BC119035.1 | - | 3 - 4 | 481 | 8733784 | 77 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0800000132.mm.1Set Membership: |
Amplicon length between 71 and 85
Mammalian Gene Collection
Recommended Assay
Mus musculus
1700
Inventoried
Probe spans exons
|
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670555 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670550 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670554 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670556 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670551 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670559 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670553 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670552 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670560 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2040161 | AK145471.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2040161 | BC116988.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2040161 | BC119035.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2040161 | NM_025924.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2040161 | AK011127.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 520538 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 862197 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 646742 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 139149 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 270333 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 318384 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 722778 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 55827 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P153610 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P177286 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2040161 | AK145471.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2040161 | BC116988.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2040161 | BC119035.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2040161 | NM_025924.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2040161 | AK011127.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P410830 | AK145471.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P410830 | AK011127.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P263386 | AK033239.1 | mouse_transcriptome |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670559 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670552 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670550 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670560 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670556 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670554 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670551 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670553 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25670555 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670665 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670648 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670652 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670594 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670559 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670638 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670560 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670552 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670598 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670550 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670583 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670543 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670609 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670620 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670625 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670547 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670572 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670571 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670616 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670628 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670629 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670561 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670567 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670549 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670603 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670650 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670622 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670621 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670626 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670608 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670586 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670563 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670557 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670574 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670618 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670607 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670569 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670540 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670641 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670601 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670584 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670636 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670634 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670565 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670663 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670623 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670611 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670578 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670596 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670605 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670643 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670554 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670639 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25670645 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670550 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670541 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07314872 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07129663 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670598 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670551 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670652 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670653 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07085463 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670575 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670565 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07016186 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670569 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670567 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670545 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06786840 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670584 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06951400 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06879879 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670552 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670594 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670651 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670571 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670659 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670648 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07244756 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07007380 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670595 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670586 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670543 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670580 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670549 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670556 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06822912 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06990935 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670561 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25670563 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07129664 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07271773 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10570419 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570420 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570423 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570427 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570422 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570425 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570421 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570424 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10570426 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1452971_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10570418 | - | - |
| Mouse Genome 430 2.0 Array | 1452971_at | - | - |
| Mouse Genome 430 2.0 Array | 1452971_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 67031_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 67031_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0800001248.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001248.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001248.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001243.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001243.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001243.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001247.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001247.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001247.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001244.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001244.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001244.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001253.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001253.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001253.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001246.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001246.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001246.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001250.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001250.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001250.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001251.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001251.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001251.mm.1 | TC0800000132.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0800001252.mm.1 | NM_025924.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001252.mm.1 | NM_025924.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0800001252.mm.1 | TC0800000132.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1452971_PM_at | - | - |
| Mouse Expression Set 430 | 1452971_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1452971_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1452971_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 765926 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2459858 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2511401 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2459858 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2511401 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2459858 | - | - |
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