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          • Home
          • › Search Tool
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          • › Mm01305439_g1
          See other SIX5 GE Assays ›
          Gene Symbol:
          Six5
          Gene Name:
          sine oculis-related homeobox 5
          Gene Aliases:
          Dmahp, MDMAHP, TrexBF
          Chromosome Location:
          Chr.7: 19094544 - 19098549 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01305439_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Six5
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_011383.1 NP_035513.1 2 - 3 1664 94
          GenBank mRNA D83146.1 - 2 - 3 1415 94

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0700000287.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 3' Most Detect Genomic DNA Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Six5

          Panther Classification:

          Molecular Function -

          homeodomain transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          lens development in camera-type eye
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          multicellular organism development
          spermatid development
          negative regulation of cell proliferation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          negative regulation of skeletal muscle satellite cell proliferation
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          DNA binding
          sequence-specific DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991390 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991400 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991409 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991405 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991397 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991399 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991406 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991407 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991402 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991398 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991404 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991408 - -
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P219385 D83146.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P219385 NM_011383.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P219385 D83146.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P219385 NM_011383.1 mouse_transcriptome
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 347786 - -
          Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P109855 - -
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P219385 D83146.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P219385 NM_011383.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P219385 D83146.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P219385 NM_011383.1 mouse_transcriptome
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991394 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991417 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991410 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991401 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991397 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991391 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991414 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991390 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991400 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991418 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991411 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991408 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991404 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991392 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991398 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991406 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991393 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991413 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991416 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P24991420 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P109855 - -
          Whole Mouse Genome G4122A A_51_P219385 D83146.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P219385 NM_011383.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P219385 D83146.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P219385 NM_011383.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P112645 - -
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P129169 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P109855 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P06262218 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P06661485 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P06661516 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P06661510 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P06661500 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991405 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991408 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991390 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991397 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991398 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991406 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991400 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991404 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991407 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991399 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991402 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P24991409 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991514 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991429 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991350 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991354 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991421 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991502 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991340 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991449 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991453 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991465 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991434 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991492 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991391 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991343 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991393 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991392 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991467 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991464 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991410 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991509 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991404 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991436 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991408 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991341 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991447 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991489 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991338 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991400 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991441 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991416 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991462 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991346 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991352 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991454 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991474 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991406 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991499 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991451 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991511 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991483 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991414 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991336 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991427 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991494 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991358 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991418 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991348 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991507 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991484 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991432 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991444 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991329 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991411 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991390 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991439 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991458 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991413 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991487 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991425 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991398 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991455 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991498 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991510 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991442 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991490 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991342 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991417 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991469 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991476 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991461 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991481 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991506 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991472 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991486 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991345 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991356 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991478 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991496 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991423 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991402 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991515 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991470 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P24991394 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189629 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991459 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06324706 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991429 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06596915 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991462 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030255 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991409 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189614 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030267 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991506 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991434 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991445 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189618 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991402 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991416 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06595361 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189617 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189631 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06661490 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991499 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991418 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991404 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06661500 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P05925003 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991442 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06479857 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189638 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991390 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030264 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06661492 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P05925001 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030273 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030268 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991503 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189641 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991398 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06189637 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991413 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P05925000 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991509 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991392 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06081931 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991511 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991407 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030265 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06479858 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06479861 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06318653 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030266 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06479860 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P06030261 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991410 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991502 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P24991406 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Gene 1.0 ST Array 10550594 - -
          Affymetrix Mouse Gene 1.0 ST Array 10550595 - -
          Affymetrix Mouse Gene 1.0 ST Array 10550596 - -
          Affymetrix HT MG-430 PM Array Plate 1427560_PM_at - -
          Affymetrix Mouse Gene 1.1 ST Array 10550593 - -
          Mouse Genome 430 2.0 Array 1427560_PM_at - -
          Mouse Genome 430 2.0 Array 1427560_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 20475_PM_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 20475_at - -
          Affymetrix Mouse Clariom S Array PSR0700002172.mm.1 TC0700000287.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0700002172.mm.1 NM_011383.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002172.mm.1 NM_011383.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002169.mm.1 TC0700000287.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0700002169.mm.1 NM_011383.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002169.mm.1 NM_011383.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002170.mm.1 TC0700000287.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0700002170.mm.1 NM_011383.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002170.mm.1 NM_011383.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002171.mm.1 TC0700000287.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0700002171.mm.1 NM_011383.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700002171.mm.1 NM_011383.1 Refseq
          Mouse Expression Set 430 1427560_at - -
          Mouse Expression Set 430 1427560_PM_at - -
          Murine Genome U74v2 Set 97122_at - -
          Murine Genome U74v2 Set 97122_PM_at - -
          Mouse Genome 430A 2.0 Array 1427560_PM_at - -
          Mouse Genome 430A 2.0 Array 1427560_at - -
          Affymetrix HT Mouse Genome 430A Array 1427560_at - -
          Affymetrix HT Mouse Genome 430A Array 1427560_PM_at - -
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 857202 - -
          Array Name Probe IDs Targets Target Type
          MouseWG-6 v2 Expression BeadChip 100060524 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_2509472 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_1247751 - -
          MouseRef-8 v2 Expression BeadChip ILMN_2995454 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2995454 - -

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          Host server : magellan-search-green-55658555d6-72rkq:80/100.66.79.224:80.
          git-commit: ec8e7df5f8fec8d765bd419205f1b5046a016d37
          git-url: https://github.com/thermofisher/magellan-search
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