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          • › Search Tool
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          • › Mm01305934_m1
          See other HOXC11 GE Assays ›
          Gene Symbol:
          Hoxc11
          Gene Name:
          homeobox C11
          Gene Aliases:
          Hox-3.7
          Chromosome Location:
          Chr.15: 102954526 - 102956701 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01305934_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hoxc11
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001024842.1 NP_001020013.1 1 - 2 688 78
          GenBank mRNA BC139233.1 - 1 - 2 734 8862255 78
          BC139269.1 - 1 - 2 734 8862291 78

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1500001116.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hoxc11

          Panther Classification:

          Molecular Function -

          homeodomain transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          skeletal system development
          metanephros development
          organ induction
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          multicellular organism development
          anterior/posterior pattern specification
          proximal/distal pattern formation
          embryonic digit morphogenesis
          positive regulation of transcription from RNA polymerase II promoter
          embryonic skeletal joint morphogenesis
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          DNA binding
          sequence-specific DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500960 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500978 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500976 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500959 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500966 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500968 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500965 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500962 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500977 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500964 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500975 - -
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2028399 BC139233.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2028399 BC139269.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2028399 NM_001024842.1 mouse_transcriptome
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 495639 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 684807 - -
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2028399 BC139233.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2028399 BC139269.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2028399 NM_001024842.1 mouse_transcriptome
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500939 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500975 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500947 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500967 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500965 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500936 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500921 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500978 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500937 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500950 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500953 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500976 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500971 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500929 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500946 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500941 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500945 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500972 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500979 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500951 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500956 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500919 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500957 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500934 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500960 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500932 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500924 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500973 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500940 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500949 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500930 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500948 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500962 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500920 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500928 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500943 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500917 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500968 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500970 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500966 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500942 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30500925 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P03119411 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500964 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500965 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500959 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500966 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500977 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500960 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500968 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500975 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500976 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500962 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30500978 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500979 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500946 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501015 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500976 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501024 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501033 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500901 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500888 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500896 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500917 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500959 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501036 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500975 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500965 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501047 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500972 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500947 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500920 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500932 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501016 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500943 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500895 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500911 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500902 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500925 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500978 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501037 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500930 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500956 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501018 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500904 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501040 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501020 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501044 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500909 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500949 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501041 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501034 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500953 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500957 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501058 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500916 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500928 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500885 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500970 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501032 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500941 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501030 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500973 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500919 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500936 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500890 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500945 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500906 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501042 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500892 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500951 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501050 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500971 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501054 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501029 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500937 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500899 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500880 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500898 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500939 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500883 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500967 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500934 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500907 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500915 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500921 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501021 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501027 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501045 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500968 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501025 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501055 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500913 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500894 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501052 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500926 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30501038 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30500962 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11986373 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12077227 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500921 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12296431 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500925 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500970 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11986382 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500973 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500979 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12012145 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500913 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500928 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500890 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12224401 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500932 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500888 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12212259 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500949 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12212268 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500968 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500906 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500895 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500929 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500920 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500936 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500930 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500965 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500917 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500940 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500953 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500978 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11986366 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500967 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12077225 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11986386 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500896 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12296452 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500902 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500962 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500883 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500885 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12296441 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500909 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500943 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500942 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12296436 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12077223 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500916 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12012144 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500880 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12296460 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500904 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500951 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500956 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500945 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500892 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500901 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500907 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30500947 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Gene 1.0 ST Array 10427279 - -
          Affymetrix Mouse Gene 1.0 ST Array 10427278 - -
          Affymetrix Mouse Gene 1.1 ST Array 10427277 - -
          Affymetrix Mouse Clariom S Array PSR1500008976.mm.1 NM_001024842.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1500008976.mm.1 NM_001024842.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1500008976.mm.1 TC1500001116.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1500008974.mm.1 TC1500001116.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1500008975.mm.1 NM_001024842.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1500008975.mm.1 NM_001024842.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1500008975.mm.1 TC1500001116.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1500008977.mm.1 TC1500001116.mm.1 MTA TC
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 350406 - -
          Array Name Probe IDs Targets Target Type
          Illumina mouse-6 v1.1 expression beadchip ILMN_1245642 - -
          MouseRef-8 v2 Expression BeadChip ILMN_2988178 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2988178 - -

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          Host server : magellan-search-green-55658555d6-sqmxq:80/100.66.77.222:80.
          git-commit: ec8e7df5f8fec8d765bd419205f1b5046a016d37
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.41.0-Offline