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          • Home
          • › Search Tool
          • › Search Results
          • › Mm01345276_mH
          See other CAST GE Assays ›
          Gene Symbol:
          Cast
          Gene Name:
          calpastatin
          Gene Aliases:
          -
          Chromosome Location:
          Chr.13: 74692366 - 74808874 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01345276_mH
          Best Coverage
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          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cast
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001301153.1 NP_001288082.1 30 - 31 2570 80
          NM_001301155.1 NP_001288084.1 28 - 29 2298 80
          NM_001301156.1 NP_001288085.1 27 - 28 2244 80
          NM_001301157.1 NP_001288086.1 26 - 27 2208 80
          NM_001301158.1 NP_001288087.1 15 - 16 1375 80
          NM_001301160.1 NP_001288089.1 15 - 16 1333 80
          NM_001301181.1 NP_001288110.1 15 - 16 1378 80
          NM_009817.4 NP_033947.1 29 - 30 2330 80
          GenBank mRNA AB026997.1 - 30 - 31 2569 80
          AF190151.1 - 15 - 16 1276 80
          AF190152.1 - 15 - 16 1321 80
          AK028843.1 - 29 - 30 2292 80
          AK029293.1 - 28 - 29 2214 80
          AK036576.1 - 27 - 28 2115 80
          AK040688.1 - 5 - 6 376 80
          AK083310.1 - 27 - 28 2147 80
          AK083395.1 - 27 - 28 2136 80
          AK089108.1 - 27 - 28 2142 80
          AK161284.1 - 15 - 16 1306 80
          BC010603.1 - 26 - 27 2062 3710078 80

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1300002326.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cast

          Panther Classification:

          Molecular Function -

          protein-binding activity modulator protease inhibitor

          Gene Ontology Categories:

          Function(s) Process(es)

          egg activation
          negative regulation of peptidase activity
          negative regulation of endopeptidase activity
          protein catabolic process
          negative regulation of catalytic activity
          negative regulation of cell cycle arrest
          negative regulation of type B pancreatic cell apoptotic process
          protease binding
          cysteine-type endopeptidase inhibitor activity
          calcium-dependent cysteine-type endopeptidase inhibitor activity
          peptidase inhibitor activity
          poly(A) RNA binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1300015404.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015404.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015399.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015399.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015400.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015400.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015405.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015405.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015396.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015396.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015397.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015397.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015401.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015401.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015403.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015403.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015398.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015398.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015407.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015407.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015406.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015406.mm.1 TC1300002326.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300015408.mm.1 NM_009817.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1300015408.mm.1 TC1300002326.mm.1 MTA TC

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          Host server : magellan-search-green-55658555d6-72rkq:80/100.66.79.224:80.
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