Assay Details

Gene Symbol: Podxl
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138848.1	NP_620203.1	4 - 5	1032		75
RefSeq	XM_008762758.1	XP_008760980.1	4 - 5	1192		75
GenBank mRNA	AB020726.1	-	4 - 5	1105		75
	AF109393.1	-	4 - 5	1032		75
	BC070886.1	-	4 - 5	1102	7098164	75

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400002631.rn.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Mammalian Gene Collection

Recommended Assay

Rattus norvegicus

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Podxl

Panther Classification:

Molecular Function -

cell adhesion molecule

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P582467	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	349609	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	580886	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	516684	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	676748	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	500760	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	544081	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	376051	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	949598	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	100324	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	812346	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	593443	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	417669	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	734494	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	272115	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	45028	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	143006	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530493	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	702449	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	743573	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	234300	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164394	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	970202	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	438260	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	389882	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	329465	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	726112	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	718134	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	330365	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	160022	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	284766	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	94872	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	328517	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	116337	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	251874	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	60653	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	492632	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	495318	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	950717	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	539221	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	168995	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	156946	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	143157	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	87209	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	130590	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P582467	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P582467	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P582467	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P582467	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700419577	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	27800	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	43687	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	1410	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	9373	-	-
Agilent Rat cDNA Microarray (G4105A)	700313233	-	-
Agilent Rat cDNA Microarray (G4105A)	700419577	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10861671	-	-
Affymetrix Rat Gene 1.0 ST Array	10861665	-	-
Affymetrix Rat Gene 1.0 ST Array	10861670	-	-
Affymetrix Rat Gene 1.0 ST Array	10861666	-	-
Affymetrix Rat Gene 1.0 ST Array	10861668	-	-
Affymetrix Rat Gene 1.0 ST Array	10861664	-	-
Affymetrix Rat Gene 1.0 ST Array	10861663	-	-
Affymetrix Rat Gene 1.0 ST Array	10861667	-	-
Affymetrix Rat Gene 1.0 ST Array	10861669	-	-
Affymetrix Rat Gene 1.1 ST Array	10861662	-	-
Rat Genome 230 2.0 Array	1385823_PM_s_at	-	-
Rat Genome 230 2.0 Array	1387933_s_at	-	-
Rat Genome 230 2.0 Array	1385823_s_at	-	-
Rat Genome 230 2.0 Array	1387933_PM_s_at	-	-
Rat Genome 230 2.0 Array	1369895_s_at	-	-
Rat Genome 230 2.0 Array	1369895_PM_s_at	-	-
Affymetrix HT Rat Focus Array	1369895_s_at	-	-
Affymetrix HT Rat Focus Array	1385823_s_at	-	-
Affymetrix HT Rat Focus Array	1385823_PM_s_at	-	-
Affymetrix HT Rat Focus Array	1369895_PM_s_at	-	-
Affymetrix HT Rat Focus Array	1387933_PM_s_at	-	-
Affymetrix HT Rat Focus Array	1387933_s_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400018666.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018676.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018669.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018667.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018668.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018671.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018675.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018665.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018672.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018664.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018670.rn.1	TC0400002631.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400018674.rn.1	TC0400002631.rn.1	RTA TC
Rat Expression Set 230	1369895_PM_s_at	-	-
Rat Expression Set 230	1385823_PM_s_at	-	-
Rat Expression Set 230	1369895_s_at	-	-
Rat Expression Set 230	1385823_s_at	-	-
Rat Expression Set 230	1387933_PM_s_at	-	-
Rat Expression Set 230	1387933_s_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10861662	-	-
Rat Genome U34 Set	rc_AA964715_at	-	-
Rat Genome U34 Set	rc_AI111966_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22175515	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369415	-	-
RatRef-12 Expression BeadChip	ILMN_59074	-	-

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map