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          • Home
          • › Search Tool
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          • › Rn01427704_m1
          See other PER2 GE Assays ›
          Gene Symbol:
          Per2
          Gene Name:
          period circadian clock 2
          Gene Aliases:
          rPER2
          Chromosome Location:
          Chr.9: 98555154 - 98597323 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01427704_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Per2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031678.1 NP_113866.1 22 - 23 3725 100
          XM_006245476.2 XP_006245538.1 22 - 23 3960 100
          XM_006245477.2 XP_006245539.1 22 - 23 3876 100
          GenBank mRNA AB016532.1 - 22 - 23 3725 100

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0900002464.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Per2

          Panther Classification:

          Molecular Function -

          transcription cofactor gene-specific transcriptional regulator

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          response to ischemia
          glycogen biosynthetic process
          gluconeogenesis
          transcription, DNA-templated
          fatty acid metabolic process
          signal transduction
          circadian rhythm
          regulation of vasoconstriction
          lactate biosynthetic process
          negative regulation of protein ubiquitination
          circadian regulation of gene expression
          regulation of circadian rhythm
          negative regulation of circadian rhythm
          negative regulation of transcription, DNA-templated
          regulation of neurogenesis
          regulation of insulin secretion
          white fat cell differentiation
          regulation of cell cycle
          regulation of glutamate uptake involved in transmission of nerve impulse
          negative regulation of DNA-templated transcription, termination
          negative regulation of fat cell proliferation
          histone H3 deacetylation
          circadian regulation of translation
          negative regulation of transcription regulatory region DNA binding
          transcription regulatory region sequence-specific DNA binding
          transcription factor activity, transcription factor binding
          core promoter binding
          transcription corepressor binding
          transcription coactivator activity
          signal transducer activity
          protein binding
          kinase binding
          nuclear hormone receptor binding
          pre-mRNA binding
          histone deacetylase binding
          ubiquitin binding
          RNA polymerase binding
          histone methyltransferase binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P708593 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 183378 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 278748 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 778896 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 423572 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 966881 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 573117 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 669114 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 18574 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 848653 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 463523 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 266711 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 151622 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 922228 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 594440 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 101534 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 212838 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 608396 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 778001 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 824325 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 472953 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 925492 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 435881 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 635109 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 294205 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 82289 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 708467 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 123783 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 209649 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 627696 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 787498 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 477210 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 4893 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 35228 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 110472 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 77755 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P708593 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P708593 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P708593 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P708593 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700416589 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 3333 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 34224 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 84388 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 102512 - -
          Agilent Rat cDNA Microarray (G4105A) 700416589 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10929858 - -
          Affymetrix Rat Gene 1.0 ST Array 10929850 - -
          Affymetrix Rat Gene 1.0 ST Array 10929844 - -
          Affymetrix Rat Gene 1.0 ST Array 10929843 - -
          Affymetrix Rat Gene 1.0 ST Array 10929856 - -
          Affymetrix Rat Gene 1.0 ST Array 10929863 - -
          Affymetrix Rat Gene 1.0 ST Array 10929855 - -
          Affymetrix Rat Gene 1.0 ST Array 10929852 - -
          Affymetrix Rat Gene 1.0 ST Array 10929849 - -
          Affymetrix Rat Gene 1.0 ST Array 10929857 - -
          Affymetrix Rat Gene 1.0 ST Array 10929862 - -
          Affymetrix Rat Gene 1.0 ST Array 10929866 - -
          Affymetrix Rat Gene 1.0 ST Array 10929859 - -
          Affymetrix Rat Gene 1.0 ST Array 10929846 - -
          Affymetrix Rat Gene 1.0 ST Array 10929848 - -
          Affymetrix Rat Gene 1.0 ST Array 10929861 - -
          Affymetrix Rat Gene 1.0 ST Array 10929845 - -
          Affymetrix Rat Gene 1.0 ST Array 10929851 - -
          Affymetrix Rat Gene 1.0 ST Array 10929854 - -
          Affymetrix Rat Gene 1.0 ST Array 10929865 - -
          Affymetrix Rat Gene 1.0 ST Array 10929847 - -
          Affymetrix Rat Gene 1.0 ST Array 10929860 - -
          Affymetrix Rat Gene 1.0 ST Array 10929864 - -
          Affymetrix Rat Gene 1.1 ST Array 10929842 - -
          Rat Genome 230 2.0 Array 1378560_at - -
          Rat Genome 230 2.0 Array 1368303_at - -
          Rat Genome 230 2.0 Array 1368303_PM_at - -
          Rat Genome 230 2.0 Array 1378560_PM_at - -
          Affymetrix HT Rat Focus Array 1378560_at - -
          Affymetrix HT Rat Focus Array 1368303_at - -
          Affymetrix HT Rat Focus Array 1378560_PM_at - -
          Affymetrix HT Rat Focus Array 1368303_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0900020201.rn.1 TC0900002464.rn.1 RTA TC
          Rat Expression Set 230 1368303_PM_at - -
          Rat Expression Set 230 1368303_at - -
          Rat Expression Set 230 1378560_PM_at - -
          Rat Expression Set 230 1378560_at - -
          Affymetrix Rat Gene 1.0 ST Array 10929842 - -
          Rat Genome U34 Set AB016532_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20825675 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1367467 - -
          RatRef-12 Expression BeadChip ILMN_50387 - -

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