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          • Home
          • › Search Tool
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          • › Rn01511353_g1
          See other CALCA GE Assays ›
          Gene Symbol:
          Calca
          Gene Name:
          calcitonin-related polypeptide alpha
          Gene Aliases:
          CAL6, CGRP, Cal1, Calc, RATCAL6, calcitonin
          Chromosome Location:
          Chr.1: 184184018 - 184188938 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01511353_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Calca
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001033955.1 NP_001029127.1 2 - 3 216 129
          NM_001033956.1 NP_001029128.1 2 - 3 192 129
          NM_017338.2 NP_059034.1 2 - 3 192 129
          XM_008759676.1 XP_008757898.1 2 - 3 243 129
          GenBank mRNA BG663259.1 - 2 - 3 158 129
          CB711853.1 - 2 - 3 129
          M26137.1 - 1 - 2 129
          V01228.1 - 2 - 3 129
          V01229.1 - 1 - 2 129
          V01231.1 - 1 - 2 129

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100006458.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Calca

          Panther Classification:

          Molecular Function -

          peptide hormone

          Gene Ontology Categories:

          Function(s) Process(es)

          endothelial cell proliferation
          vasculature development
          neurological system process involved in regulation of systemic arterial blood pressure
          vasodilation of artery involved in baroreceptor response to increased systemic arterial blood pressure
          regulation of heart rate
          G-protein coupled receptor internalization
          monocyte chemotaxis
          protein phosphorylation
          cellular calcium ion homeostasis
          inflammatory response
          leukocyte cell-cell adhesion
          adenylate cyclase-activating G-protein coupled receptor signaling pathway
          activation of adenylate cyclase activity
          positive regulation of cytosolic calcium ion concentration
          neuropeptide signaling pathway
          neuromuscular junction development
          embryo implantation
          aging
          feeding behavior
          regulation of heart contraction
          regulation of blood pressure
          response to heat
          negative regulation of calcium ion transport into cytosol
          negative regulation of ossification
          positive regulation of cAMP biosynthetic process
          receptor internalization
          negative regulation of neurological system process
          activation of protein kinase activity
          positive regulation of interleukin-1 alpha production
          positive regulation of interleukin-8 production
          vasodilation
          endothelial cell migration
          positive regulation of macrophage differentiation
          negative regulation of osteoclast differentiation
          positive regulation of adenylate cyclase activity
          negative regulation of blood pressure
          positive regulation of ossification
          negative regulation of bone resorption
          positive regulation of cell adhesion
          negative regulation of transcription, DNA-templated
          positive regulation of vasodilation
          negative regulation of smooth muscle contraction
          response to pain
          detection of temperature stimulus involved in sensory perception of pain
          regulation of cytosolic calcium ion concentration
          positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway
          cellular response to tumor necrosis factor
          cellular response to nerve growth factor stimulus
          receptor binding
          neuropeptide hormone activity
          calcitonin receptor binding
          protein complex binding
          identical protein binding

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P018761 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P018766 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 383778 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 854850 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 432336 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 672572 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 176580 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P018761 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P018766 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P018761 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P018766 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P018761 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P018766 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P106221 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11924 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 57351 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 80126 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 93498 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10725058 - -
          Affymetrix Rat Gene 1.0 ST Array 10725052 - -
          Affymetrix Rat Gene 1.0 ST Array 10725056 - -
          Affymetrix Rat Gene 1.0 ST Array 10725054 - -
          Affymetrix Rat Gene 1.0 ST Array 10725053 - -
          Affymetrix Rat Gene 1.0 ST Array 10725055 - -
          Affymetrix Rat Gene 1.0 ST Array 10725059 - -
          Affymetrix Rat Gene 1.0 ST Array 10725057 - -
          Affymetrix Rat Gene 1.1 ST Array 10725051 - -
          Rat Genome 230 2.0 Array 1370775_a_at - -
          Rat Genome 230 2.0 Array 1370775_PM_a_at - -
          Rat Genome 230 2.0 Array 1369117_at - -
          Rat Genome 230 2.0 Array 1369116_PM_a_at - -
          Rat Genome 230 2.0 Array 1369116_a_at - -
          Rat Genome 230 2.0 Array 1369117_PM_at - -
          Affymetrix HT Rat Focus Array 1370775_a_at - -
          Affymetrix HT Rat Focus Array 1369116_a_at - -
          Affymetrix HT Rat Focus Array 1369117_PM_at - -
          Affymetrix HT Rat Focus Array 1370775_PM_a_at - -
          Affymetrix HT Rat Focus Array 1369116_PM_a_at - -
          Affymetrix HT Rat Focus Array 1369117_at - -
          Affymetrix Rat Clariom S Assay PSR0100050710.rn.1 TC0100006458.rn.1 RTA TC
          Rat Expression Set 230 1370775_a_at - -
          Rat Expression Set 230 1369117_at - -
          Rat Expression Set 230 1369116_a_at - -
          Rat Expression Set 230 1369116_PM_a_at - -
          Rat Expression Set 230 1370775_PM_a_at - -
          Rat Expression Set 230 1369117_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10725051 - -
          Rat Genome U34 Set M11597_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1366705 - -
          RatRef-12 Expression BeadChip ILMN_53892 - -

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