Assay Details

Gene Symbol: Ifit1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008331.3	NP_032357.2	1 - 2	97		80
GenBank mRNA	AK089608.1	-	1 - 2	104		80
	AK131669.1	-	1 - 2	94		80
	AK144230.1	-	1 - 2	102		80
	AK150352.1	-	1 - 2	104		80
	AK150424.1	-	1 - 2	98		80
	AK150609.1	-	1 - 2	107		80
	AK151125.1	-	1 - 2	107		80
	AK151158.1	-	1 - 2	98		80
	AK151278.1	-	1 - 2	107		80
	AK151298.1	-	1 - 2	101		80
	AK151983.1	-	1 - 2	100		80
	AK152112.1	-	1 - 2	100		80
	AK152753.1	-	1 - 2	98		80
	AK153184.1	-	1 - 2	100		80
	AK153500.1	-	1 - 2	98		80
	AK153532.1	-	1 - 2	107		80
	AK157848.1	-	1 - 2	98		80
	BC003768.1	-	1 - 2	81	3496673	80
	U43084.1	-	1 - 2	72		80

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000504.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK089608.1,AK144230.1,AK150352.1,AK150424.1,AK150609.1,AK151125.1,AK151158.1,AK151278.1,AK151298.1,AK152753.1,AK153184.1,AK153500.1,AK153532.1,AK157848.1,BC003768.1,NM_008331.3,U43084.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Mammalian Gene Collection

Mus musculus

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ifit1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P327751	U43084.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P327751	AK144230.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P327751	U43084.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P327751	AK144230.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	790323	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	750331	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	614822	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	485355	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	306632	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	130435	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P100920	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P327751	U43084.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P327751	AK144230.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P327751	U43084.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P327751	AK144230.1	mouse_transcriptome
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081355	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081358	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081364	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081354	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081365	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081359	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081356	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081362	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081361	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081368	-	-
Agilent Mouse Promoter ChIP-on-Chip A)	A_68_P32081366	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P09158620	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P100920	-	-
Whole Mouse Genome G4122A	A_51_P327751	U43084.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P327751	AK144230.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P327751	U43084.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P327751	AK144230.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P111203	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P120242	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P100920	-	-
Agilent Mouse Proximal Promoter ChIP-on-Chip A)	A_68_P14249587	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081424	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081393	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081414	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081379	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081458	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081402	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081440	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081407	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081359	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081374	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081362	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081457	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081409	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081439	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081423	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081352	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081404	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081445	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081448	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081415	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081417	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081450	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081383	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081416	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081459	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081360	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081358	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081387	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081371	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081386	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081436	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081438	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081418	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081396	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081388	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081454	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081382	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081463	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081431	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081381	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081420	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081426	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081408	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081377	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081456	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081434	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081390	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081392	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081376	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081411	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081461	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081380	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081356	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081442	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081364	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P32081361	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14334318	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081457	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081365	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081366	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081360	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081364	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081362	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081379	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14248115	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081393	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081376	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081462	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081371	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081355	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081388	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081390	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081368	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081445	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081383	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14385368	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14255872	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14449210	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14339076	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081395	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081382	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14255863	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081402	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14339044	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081396	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14338917	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14339081	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14195165	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P14449217	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081377	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081456	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081358	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081450	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081386	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081359	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081463	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081387	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081448	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081451	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081454	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081459	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081458	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P32081356	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10462626	-	-
Affymetrix Mouse Gene 1.0 ST Array	10462627	-	-
Affymetrix Mouse Gene 1.0 ST Array	10462624	-	-
Affymetrix Mouse Gene 1.0 ST Array	10462625	-	-
Affymetrix HT MG-430 PM Array Plate	1450783_PM_at	-	-
Affymetrix Mouse Gene 1.1 ST Array	10462623	-	-
Mouse Genome 430 2.0 Array	1450783_PM_at	-	-
Mouse Genome 430 2.0 Array	1450783_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	15957_PM_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	15957_at	-	-
Affymetrix Mouse Clariom S Array	PSR1900004480.mm.1	NM_008331.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004480.mm.1	NM_008331.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004480.mm.1	TC1900000504.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900004477.mm.1	NM_008331.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004477.mm.1	NM_008331.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004477.mm.1	TC1900000504.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900004479.mm.1	NM_008331.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004479.mm.1	NM_008331.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004479.mm.1	TC1900000504.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900004478.mm.1	NM_008331.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004478.mm.1	NM_008331.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900004478.mm.1	TC1900000504.mm.1	MTA TC
Mouse Expression Set 430	1450783_at	-	-
Mouse Expression Set 430	1450783_PM_at	-	-
Murine Genome U74v2 Set	100981_PM_at	-	-
Murine Genome U74v2 Set	100981_at	-	-
Mouse Genome 430A 2.0 Array	1450783_PM_at	-	-
Mouse Genome 430A 2.0 Array	1450783_at	-	-
Affymetrix HT Mouse Genome 430A Array	1450783_PM_at	-	-
Affymetrix HT Mouse Genome 430A Array	1450783_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	607896	-	-

Array Name	Probe IDs	Targets	Target Type
MouseWG-6 v2 Expression BeadChip	5270373	-	-
Illumina mouse-6 v1.0 expression beadchip	5270373	-	-
Illumina mouseRef-8 v1.0 expression beadchip	0005270373	-	-
Illumina mouseRef-8 v1.1 expression beadchip	ILMN_2774346	-	-
Illumina mouse-6 v1.1 expression beadchip	ILMN_2774346	-	-
mouse-6 v1.1 (Illumina)	scl53191.3_226-S	-	-
Illumina Sentrix mouse-6.v1 bead array	5270373	-	-
Illumina Sentrix MouseRef-8 Expression BeadChip	scl53191.3_226-S	-	-
Illumina Sentrix Mouse-6 Expression BeadChip (2)	5270373	-	-
MouseRef-8 v2 Expression BeadChip	ILMN_2774340	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_2774340	-	-

Citations (1)

Distinct RIG-I and MDA5 signaling by RNA viruses in innate immunity.

Authors: Loo YM, Fornek J, Crochet N, Bajwa G, Perwitasari O, Martinez-Sobrido L, Akira S, Gill MA, Garcia-Sastre A, Katze MG, Gale M Jr
Journal: J Virol - Page No 335 (Tue Jan 01 00:00:00 EST 2008)
Volume (Year): 82 (2008)
Product Usage: -

Availability	Inventoried
Catalog #	4331182
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Genomic Map